Package index • paulmisc

Epidemiological Visualization

Functions for creating epidemic curves and simulating outbreak data

geom_epicurve() stat_epicurve(): Epicurve geom: one square per case
scale_y_epicurve(): Y-axis scale with integer breaks for epidemic curves
coord_epicurve(): Coordinate system for epidemic curves
GeomEpicurve: GeomEpicurve: ggproto for drawing case squares
StatEpicurve: StatEpicurve: ggproto for stacking individual cases
simulate_outbreak(): Simulate onset dates for a point-source disease outbreak
annotate_event() annotate_period(): Annotate epidemic curves with events and periods
epicurve_footnote(): Summary footnote for an epicurve
epicurve_ggplotly(): Interactive epicurve via plotly with sensible defaults

Interactive web applications